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A comparison of various fitting techniques for predicting yield for the Ubolratana reservoir (Thailand) from a time series data on catch and hydrological features ArchiMer
Moreau, Jacques; Lek, Sovan; Leelaprata, Wattana; Sricharoendham, Boonsong; Villanueva, Ching-maria.
Actual catch (commercial catch and local consumption) have been made available by the Royal Thai Department of Fisheries for the Ubolratana reservoir, North East Thailand, since the impoundment of the lake in 1965. The data have been used to assess the possible relationship between the actual catch and morphometric parameters of the lake (maximum area, depth, shore line, difference between maximum and minimum area) and actual catch the year before. A comparison of the predictive power is carried out between multiple linear regression analysis, a generalised additive model, a regression tree analysis, an autoregression analysis and an artificial neural network. Results show the poorly predictive power in linear system (around 40% of explained variances),...
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Ano: 2002 URL: http://archimer.ifremer.fr/doc/00177/28875/27360.pdf
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A mass-balance Ecopath model of Coastal Areas in the Mekong Delta, Vietnam ArchiMer
Van, Mai Viet; Phuong, Nguyen Thanh; Dinh, Tran Dac; Villanueva, Ching-maria; Moreau, Jacques.
A mass-balance Ecopath model of coastal areas in the Mekong Delta has been constructed for a quantitative description of the trophic structure of the ecosystem. The model is used to estimate the important biological parameters and relationships among the different ecologically important groups. The model is based on the data collected from bottom trawling. There are 14 functional groups based on 58 species from coastal areas in the Mekong Delta survey such as shrimps, squids, crabs, mackerel, small pelagics, demersal fishes, benthic feeders, predator fishes and trash fish. The biomass value was estimated from catch production and bottom trawling surveys. Results show that the estimated total biomass of exploited resources was 3.99 ton.km-2. The values of...
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Ano: 2010 URL: http://archimer.ifremer.fr/doc/00143/25419/23570.pdf
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A new application of principal response curves for summarizing abrupt and cyclic shifts of communities over space ArchiMer
Auber, Arnaud; Travers-trolet, Morgane; Villanueva, Ching-maria; Ernande, Bruno.
There is a growing need to easily describe and synthesize the dynamics of ecosystems’ components in space and time. Most multivariate analyses provide ordination diagrams or biplots that are too cluttered to allow simple reading and are unfamiliar to most users. To overcome such difficulties, a novel application of principal response curves (PRCs) is proposed. Principal response curves are traditionally used to assess treatment effects on community structure measured repeatedly over time. In this new application, the tested factor and the repeated-observation axis are replaced by time and space, respectively. The georeferencing of sampling sites permits to produce an easy-to-read map that summarizes both the temporal dynamics of the community and the...
Tipo: Text Palavras-chave: Fish communities; Multivariate analyses; Partial redundancy analysis; Spatial management tools; Spatio-temporal dynamics.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00413/52478/53266.pdf
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Atlas des Habitats des Ressources Marines de la Manche Orientale - CHARM II ArchiMer
Carpentier, Andre; Coppin, Franck; Curet, Lucie; Dauvin, Jean-claude; Delavenne, Juliette; Dewarumez, Jean-marie; Dupuis, Ludovic; Foveau, Aurélie; Garcia, Clément; Gardel, Laure; Harrop, Stuart; Just, Roger; Koubbi, Philippe; Lauria, Valentina; Martin, Corinne; Meaden, Geoff; Morin, Jocelyne; Ota, Yoshi; Rostiaux, Emilie; Smith, Bob; Spilmont, Nicolas; Vaz, Sandrine; Villanueva, Ching-maria; Verin, Yves; Walton, Joanne; Warembourg, Caroline.
Readers of our first CHARM I atlas will know that almost everything contained within the atlas was original work resulting from two years of intensive study of the Dover Strait by a dedicated and inter- disciplinary team working from bases on either side of the Channel. The present atlas has carried on this eminent precedent, though this time covering the whole of the eastern English Channel (figure 1) and widening considerably the thematic scope. We believe that readers of this current atlas will be impressed by both the breadth and depth of the information provided, and that therefore this content should be available for use in both a wide variety of fields and at various levels of interest (researchers, industries, statutory organisations, the wider...
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Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/rapport-7377.pdf
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Biodiversité et relations trophiques dans quelques milieux estuariens et lagunaires de l’Afrique de l’Ouest : Adaptations aux pressions environnementales ArchiMer
Villanueva, Ching-maria.
This work is the result of a research on West African estuaries and lagoon ecosystems: estuaries of Sine-Saloum (Senegal) and the Gambia, (The Gambia), as well as the lagoons Ébrié (Ivory Coast) and Lake Nokoué (Benin). Estuaries and lagoons are highly productive and economically important ecosystems and are among those threatened as their biodiversity and productivity are constant exposed to various disturbances. These disturbances can weaken the stability and durability of these ecosystems. This led to the problematic raised in the thesis: To approach the African western ecosystems and the environmental pressures that they undergo that eventually affect the biodiversity and the trophic relations of their aquatic living resources. This work seeks to...
Tipo: Text Palavras-chave: Milieux estuariennes et lagunaires; Relations trophiques; Adaptation; Ecopath; Reseaux neurones artificiels; Stress environnementaux; Maturité des écosystèmes.
Ano: 2004 URL: http://archimer.ifremer.fr/doc/00180/29122/29305.pdf
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Body size-trophic position relationship in marine fish depends on biological and spatial scales ArchiMer
Kopp, Dorothee; Lefebvre, Sebastien; Villanueva, Ching-maria; Ernande, Bruno.
-Food web structure can be partly characterized by species' trophic level - In marine fish, trophic level appears positively correlated to individual body size at the community scale (Jennings et al 2001) -Trophic level may change across sizes but also taxa, seasons, and habitats -Very few studies have addressed how size-dependence of trophic position varies in space, i.e. according to habitat, and whether observed community-scale patterns hold at the level of species or guilds.
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Ano: 2012 URL: http://archimer.ifremer.fr/doc/00163/27396/25627.pdf
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Can fish morphology determine its diet? ArchiMer
Chambord, Sophie; Villanueva, Ching-maria; Ernande, Bruno; Lefebvre, Sébastien.
Biodiversity is a concept that covers a lot of issues that can elucidate diversity-related functional roles to understand ecological ecosystem functioning. Biodiversity can shape ecosystem structure and functioning especially if we focus on predator-prey interactions. Moreover, the mechanisms governing prey-predator relationships will shape the emergent food web structure just as individuals’ characteristics determine the emergent demographic structure of a population. We determined the trophic ecology of fish species in the eastern English Channel by combining gut-content and geomorphometric analyses. We inferred the mechanisms of resource utilisation by Atlantic seabass and plaice by coupling measured geomorphometric determinants of prey-predator...
Tipo: Text Palavras-chave: Biodiversity; Predator-prey interaction; Eastern English Channel Stomach content analysis Geomorphometry Fish.
Ano: 2010 URL: http://archimer.ifremer.fr/doc/00143/25416/23567.pdf
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Commercial fishing patterns influence odontocete whale-longline interactions in the Southern Ocean ArchiMer
Tixier, Paul; Burch, Paul; Richard, Gaetan; Olsson, Karin; Welsford, Dirk; Lea, Mary-anne; Hindell, Mark A.; Guinet, Christophe; Janc, Anais; Gasco, Nicolas; Duhamel, Guy; Villanueva, Ching-maria; Suberg, Lavinia; Arangio, Rhys; Söffker, Marta; Arnould, John P.y..
The emergence of longline fishing around the world has been concomitant with an increase in depredation-interactions by odontocete whales (removal of fish caught on hooks), resulting in substantial socio-economic and ecological impacts. The extent, trends and underlying mechanisms driving these interactions remain poorly known. Using long-term (2003–2017) datasets from seven major Patagonian toothfish (Dissostichus eleginoides) longline fisheries, this study assessed the levels and inter-annual trends of sperm whale (Physeter macrocephalus) and/or killer whale (Orcinus orca) interactions as proportions of fishing time (days) and fishing area (spatial cells). The role of fishing patterns in explaining between-fisheries variations of probabilities of...
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Ano: 2019 URL: https://archimer.ifremer.fr/doc/00481/59242/61961.pdf
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Comparative analysis of trophic structure and interactions of two tropical lagoons ArchiMer
Villanueva, Ching-maria; Laleye, P; Albaret, J; Lae, Raymond; Tito De Morais, Luis; Moreau, J.
A comparative study of the Ebrie lagoon (Ivory Coast) and Lake Nokoue (Benin) was made based on ecotrophic model outputs that describe each system's structure and functioning. Two models were constructed using the Ecopath software to differentiate main biomass flows in the systems. Results indicate that biomasses and productions in both ecosystems are concentrated in trophic levels (TL) 2 and 3. Higher TL biomasses and productions in Lake Nokoue compared to Ebrie lagoon may be explained by the presence of acadjas. High production per biomass (P/B) and food consumption per biomass (Q/B) values indicate the high productivity of these systems and the abundance of juveniles in most groups which utilize these systems as refuge zones and nurseries. The...
Tipo: Text Palavras-chave: Ecopath; System maturity; Transfer efficiency; West Africa; Tropical lagoons.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-2009.pdf
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Complexity in trophic structure and stability in a modelled West African estuary ArchiMer
Villanueva, Ching-maria; Diouf, P.s.; Albaret, J.-j.; Moreau, J..
Un modèle Ecopath de l'estuaire du Sine-Saloum (Sénégal) comportant au total 37 groupes fonctionnels a été appliqué dans la présente étude en vue de déterminer les faits essentiels de ce système aquatique. La grande biodiversité spécifique des poissons de l'écosystème peut y jouer un rôle en assurant son intégrité, spécialement en présence de facteurs de stress, bien qu'il ait été observé que ce n'est pas entièrement le cas. Les résultats montrent qu'un autre facteur de mitigation est le niveau des forces d'interaction entre les groupes fonctionnels. La stabilité est accrue par des relations plus faibles et des pyramides plus courtes et plus larges. Bien que différentes questions se posent concernant les facteurs conduisant à la stabilité d'un système, les...
Tipo: Text Palavras-chave: Stabilité des systèmes; Sénégal; Omnivorie; Estuaire; Ecosystème côtier; Ecopath; Biodiversité; Afrique de l'Ouest; West Africa; System Stability; Senegal; Omnivory; Estuary; Ecopath; Coastal Ecosystem; Biodiversity.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/2005/publication-2554.pdf
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Contrasting tropical estuarine ecosystem functioning and stability: A comparative study ArchiMer
Villanueva, Ching-maria.
A comparative study of the Sine-saloum (Senegal) and Gambia (The Gambia) estuaries was performed based on trophic model outputs that describe the system structure and functioning. These trophic models were constructed such as to differentiate main energetic flows in the systems and express how climate change may have impacted ecosystem resilience to change. Estuarine fish assemblages are highly resilient despite exposure to vast hydrodynamic variations and stress. Coupled with strong anthropogenic-driven stresses such as fisheries and climate change, ecosystems may undergo severe regime shifts that may weaken their resilience and stability. Taxonomically related and morphologically similar species do not necessarily play similar ecological roles in these...
Tipo: Text Palavras-chave: Complex adaptative systems; Climate change; Food web models; Regime shifts; Ecosystem resilience; Trophic ecology.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00249/36034/34571.pdf
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Diel feeding periodicity, daily ration and relative food consumption in some fish populations in three reservoirs of Sri Lanka ArchiMer
Weliange, Wasantha S.; Amarasinghe, Upali S.; Moreau, Jacques; Villanueva, Ching-maria.
Twelve diel surveys were carried out in three reservoirs of Sri Lanka viz. Minneriya, Udawalawe and Victoria, to investigate diel feeding patterns, daily ration and relative food consumption in fish populations. Stomach content weights of different size classes of various fish species in the three reservoirs in 12 diel surveys were analysed using an iterative method, MAXIMS. Predominantly herbivorous or detritivorous fish species such as Amblypharyngodon melettinus and Oreochromis niloticus exhibited one peak in the diel feeding pattern. Two peak feeding periods were evident in predominantly insectivores and/or zooplanktivores (e. g., Puntius chola and Rasbora daniconius) and interestingly in macrophyte feeders (i.e., Etroplus suratensis, Puntius...
Tipo: Text Palavras-chave: Cichlidae; Cyprinidae; Trophic modelling; Freshwater fish; Feeding chronology; Diel feeding pattern.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-2134.pdf
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Diet is correlated with otolith shape in marine fish ArchiMer
Mille, Tiphaine; Mahe, Kelig; Cachera, Marie; Villanueva, Ching-maria; De Pontual, Helene; Ernande, Bruno.
Previous studies have shown that food amount influence fish otolith structure, opacity and shape and that diet composition has an effect on otolith chemical composition. This study investigated the potential correlation between diet and otolith shape in 5 wild marine fish species by addressing 4 complementary questions. First, is there a global relationship between diet and otolith shape? Second, which prey categories are involved in this relationship? Third, what are the respective contributions of food quantity and relative composition to diet–otolith shape co-variation? Fourth, is diet energetic composition related to otolith shape? For each species, we investigated how otolith shape varies with diet. These questions were tackled by describing diet in...
Tipo: Text Palavras-chave: Fourier analysis; English Channel; Interspecific; Morphometric analysis; Otolith growth; Saccular otolith; Stomach contents.
Ano: 2016 URL: https://archimer.ifremer.fr/doc/00345/45639/45269.pdf
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Does the positive body-size-trophic level relationship hold at the species level? ArchiMer
Kopp, Dorothee; Lefebvre, Sebastien; Villanueva, Ching-maria; Ernande, Bruno.
The structure, dynamics and productivity of marine ecosystems depend mainly on their underlying food webs. In temperate marine ecosystems, specifically in the English Channel, strong seasonality, habitat diversity and variability in the sources of available organic matters are controlling factors affecting the trophodynamics of these networks. Exploitation through fisheries may also alter these food webs. During the last decade, the study of trophic ecology has greatly benefited from the use of stable isotope analysis (SIA) that integrates diet information over long time periods and complements gut content analysis. Applied in complex ecosystems, such as the English Channel, SIA may help to detect nutrient pathways and trophic links. Stable isotopic...
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Ano: 2011 URL: http://archimer.ifremer.fr/doc/00161/27213/25412.pdf
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Evaluating conservation and fisheries management strategies by linking spatial prioritization software and ecosystem and fisheries modelling tools ArchiMer
Metcalfe, Kristian; Vaz, Sandrine; Engelhard, Georg H.; Villanueva, Ching-maria; Smith, Robert J.; Mackinson, Steven.
Well-designed marine protected area (MPA) networks can deliver a range of ecological, economic and social benefits, and so a great deal of research has focused on developing spatial conservation prioritization tools to help identify important areas. However, whilst these software tools are designed to identify MPA networks that both represent biodiversity and minimize impacts on stakeholders, they do not consider complex ecological processes. Thus, it is difficult to determine the impacts that proposed MPAs could have on marine ecosystem health, fisheries and fisheries sustainability. Using the eastern English Channel as a case study, this paper explores an approach to address these issues by identifying a series of MPA networks using the Marxan and Marxan...
Tipo: Text Palavras-chave: Ecopath with Ecosim; Ecospace; Marine spatial zoning; Marine trophic index; Marxan; Marxan with Zones; Systematic conservation planning.
Ano: 2015 URL: http://archimer.ifremer.fr/doc/00254/36538/37818.pdf
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Fish Assessment in the Rehabilitation Polders of Prey Nup (Cambodia) ArchiMer
Lim, Puy; Villanueva, Ching-maria; Chhouk, B; Chay, K.k.; Brun, J.m.; Moreau, Jacques.
Physical restoration of dykes and water gates along the shorelines of the Prey Nup area was done in 1998 to preserve rice field areas from being washed-off during high tides. The four first polders constructed resulted in the recuperation of about 5,500 ha for rice field cultivation. Before the rehabilitation, the area was also a common dwelling place for freshwater, brackish water and marine fish species (43 species). Information regarding effects of seasonal variations on species richness and stock assessment were obtained from capture surveys of native fishermen using 11 different kinds of fishing gears from 1998 to 2001. The influence of rehabilitating the area on the fish community species richness, stock recruitment and dynamics were investigated....
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Ano: 2005 URL: http://archimer.ifremer.fr/doc/00143/25422/23574.pdf
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FISH : shapes and swimming styles ArchiMer
Cachera, Marie; Ernande, Bruno; Villanueva, Ching-maria; Baheux, Mickael; Lefebvre, Sebastien.
By covering 80% of Earth, the global ocean is the most spread ecosystem in the world. Human activities (pollution, fisheries…) have huge impacts on both oceans and marine life. Despites overfishing and intense maritime transport, many fish species remain in the English Channel. A major challenge in biological research is to comprehend and facilitate the emergence of body shape in fishes for understanding how these organisms may respond and persist in complex and multiple environments with predictable and unpredictable perturbations. Body shape in fish is conditioned by several developmental paths and functions depending on multitude behaviours. Fishes body morphology varies in every species and in some cases had been shown to influence their occurrence,...
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Ano: 2012 URL: http://archimer.ifremer.fr/doc/00161/27217/25416.pdf
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Food Habits, Daily Ration and Relative Food Consumption in Some Fish Populations in Ubolratana Reservoir, Thailand ArchiMer
Kakkaeo, Montharop; Chittapalapong, Tanaporn; Villanueva, Ching-maria.
The diet composition and feeding habits have been investigated for several economically important indigenous species based on diel surveys collected from the Ubolratana reservoir (Thailand). For some of these populations the daily food ration, feeding periods, ingestion and evacuation rates were determined using MAXIMS, an iterative computer software utilising 24-hour series of stomach content data obtained in natural populations. The results obtained provide useful information for studies of the trophic relationship in the reservoir and can be explained by some observed migrating patterns of these fish populations.
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Ano: 2004 URL: http://archimer.ifremer.fr/doc/00143/25423/23577.pdf
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Groupement d'Intérêt Scientifique "Suivi des Impacts de l'Extraction de Granulats Marins" (GIS SIEGMA). Compte-Rendu Assemblée Générale 2 juillet 2012 ArchiMer
Desprez, Michel; Chevreau, Pierre; Duclos, Pierre-arnaud; Delpech, Jean-paul; Ernande, Bruno; Lafite, Robert; Le Bot, Sophie; De Roton, Gwenola; Tavernier, Eric; Villanueva, Ching-maria.
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Ano: 2012 URL: http://archimer.ifremer.fr/doc/00180/29095/27509.pdf
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How do fishing practices influence sperm whale (Physeter macrocephalus) depredation on demersal longline fisheries? ArchiMer
Janc, Anais; Richard, Gaetan; Guinet, Christophe; Arnould, John P. Y.; Villanueva, Ching-maria; Duhamel, Guy; Gasco, Nicolas; Tixier, Paul.
Marine mammal depredation on fisheries (animals removing fish caught on fishing gear) is a worldwide issue involving socio-economic and ecological consequences. Longline fisheries are the most impacted by odontocete (toothed whales) depredation. While technological means have provided limited efficacy in reducing depredation, this study examined the fishing practices influencing both the proportion of depredated longline sets and the amount of fish removed by whales. We used an 8-year dataset from the Patagonian toothfish (Dissostichus eleginoides) longline fisheries operating in Crozet and Kerguelen Economic Exclusive Zones (EEZs) (South Indian Ocean) and GLMMs to investigate sperm whale (Physeter macrocephalus) depredation. Sperm whale depredation...
Tipo: Text Palavras-chave: Depredation; Demersal longline; Sperm whale; Patagonian toothfish; Fishing practices.
Ano: 2018 URL: http://archimer.ifremer.fr/doc/00439/55070/56795.pdf
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